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53 results

Playful Python
This library can remove the pain of debugging python code

shorts Ever find yourself in a position where a adding a prints to your code is not enough to find the bug, but its too much of a ...

1:00
This library can remove the pain of debugging python code

605 views

3 years ago

Pymol Biomolecules
How to prepare 1000 ligands in  pdbqt for autodock

Save all the 3d structures in mol2 format and run the batch file to convert all the ligands to pdbqt format. In notepad type and save ...

5:38
How to prepare 1000 ligands in pdbqt for autodock

12,150 views

4 years ago

BioExcel CoE
BioExcel Webinar #55: MDAnalysis, interoperable analysis of biomolecular simulations in Python

MDAnalysis is one of the most widely-used Python libraries for the analysis of biomolecular simulations and structures, ...

1:09:18
BioExcel Webinar #55: MDAnalysis, interoperable analysis of biomolecular simulations in Python

6,740 views

4 years ago

Pymol Biomolecules
Autodock result protein-ligand interaction analysis using pymol | pymol biomolecules

The autodock result pdbqt file can be analysed using the schrodinger's pymol software. the 3d interactions can be taken as high ...

9:30
Autodock result protein-ligand interaction analysis using pymol | pymol biomolecules

49,239 views

3 years ago

Open Force Field Initiative
Protein Preparation in Jupyter - 2024 Mini-Workshop

Today, Jupyter notebooks are everything you need to prepare a molecular dynamics simulation. Not only do they provide a unified ...

33:32
Protein Preparation in Jupyter - 2024 Mini-Workshop

1,380 views

1 year ago

Missing Semester
Lecture 7: Debugging and Profiling (2020)

You can find the lecture notes and exercises for this lecture at https://missing.csail.mit.edu/2020/debugging-profiling/ Help us ...

54:14
Lecture 7: Debugging and Profiling (2020)

101,136 views

5 years ago

Pymol Biomolecules
Download PDB from Alphafold protein structure database

How to download pdb from alphafold2 protein database. AlphaFold is an artificial intelligence program developed by Google's ...

3:29
Download PDB from Alphafold protein structure database

3,216 views

4 years ago

Phys Whiz
How to Download Molecular Structures in Bulk from PubChem Database? [TUTORIAL]

In this tutorial, I show the process of automating the download of chemical structures from PubChem using a Python script.

15:29
How to Download Molecular Structures in Bulk from PubChem Database? [TUTORIAL]

2,294 views

1 year ago

Jake Anderson
PyMOL Tutorial — Movie Making with Trajectories

This is a tutorial on creating PyMOL movies with both changing states (trajectories) and changing camera views. Timestamps: ...

10:04
PyMOL Tutorial — Movie Making with Trajectories

3,884 views

3 years ago

Google for Developers
YouTube Developers Live: Debugging & Dealing with Errors

Jeff Posnick gets into the nitty-gritty details of what do to when things go wrong, covering best practices for debugging your ...

23:17
YouTube Developers Live: Debugging & Dealing with Errors

24,494 views

12 years ago

Pymol Biomolecules
Open babel file conversion easy method | Pymol biomolecules

openbabel is used to convert chemical file formats. Openbabel can convert more than 100 file formats like sdf mol, mol2, pdb, ...

8:22
Open babel file conversion easy method | Pymol biomolecules

4,208 views

3 years ago

Pymol Biomolecules
How to dock 1000 ligands in Autodock vina

PymolBiomoleculesTutorials molecular docking of multiple ligands with a single protein in Autodock vina virtual screening.

3:56
How to dock 1000 ligands in Autodock vina

19,178 views

4 years ago

Pymol Biomolecules
Autodock Molecular Docking tutorial for Beginners no command prompt

PymolBiomoleculesTutorials 00:18 Protein preparation 00:54 Remove water, ligands, cofactors, unwanted chains 1:28 save as ...

18:42
Autodock Molecular Docking tutorial for Beginners no command prompt

5,018 views

4 years ago

Trip and Code
#9 Debugging Python IDLE

Tutorial Lab. Programowanie komputerów Python 3.8 W tym kursie znajdziesz szczegółowe informacje na temat: ⭐ Obsługa ...

13:36
#9 Debugging Python IDLE

322 views

5 years ago

Arjoonn
How To Write Python Asyncio Code

Turn on the subtitles and here we go! A super quick demonstation of asyncio code. The way to watch this is pause and read and ...

2:09
How To Write Python Asyncio Code

368 views

9 years ago

Pymol Biomolecules
How to do Gromacs Protein Ligand MD Simulation in Windows Part 2

How to perform protein ligand complex molecular dynamics simulation using gromacs in windows. For this Molecular dynamics ...

17:02
How to do Gromacs Protein Ligand MD Simulation in Windows Part 2

3,645 views

1 year ago

Pymol Biomolecules
Molecular Dynamics of Protein - Ligand complex on Gromacs Part-2 Ligand Topology

Gromacs molecular dynamics for beginners step by step tutorial protein topology: https://youtu.be/hM2fPemCvjw gromacs md ...

9:21
Molecular Dynamics of Protein - Ligand complex on Gromacs Part-2 Ligand Topology

24,580 views

3 years ago

Craig Piercy
Introduction to Debugging

We provide a conceptual over of debugging. How to actually debug Java programs using Eclipse will be discussed in later videos ...

9:21
Introduction to Debugging

4,564 views

9 years ago

aka: Matchstic
Meet Stanley, my NVIDIA Jetson Nano drone | DIY drone pt. 4

World, meet Stanley! He will be my research drone for in-flight AI, powered by an NVIDIA Jetson Nano and an OAK-D Lite. Today ...

13:38
Meet Stanley, my NVIDIA Jetson Nano drone | DIY drone pt. 4

51,540 views

3 years ago

Marco Basile
Tutorial PyMOL: Introduction and molecules' loading
6:56
Tutorial PyMOL: Introduction and molecules' loading

2,773 views

5 years ago