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53 results
shorts Ever find yourself in a position where a adding a prints to your code is not enough to find the bug, but its too much of a ...
605 views
3 years ago
Save all the 3d structures in mol2 format and run the batch file to convert all the ligands to pdbqt format. In notepad type and save ...
12,150 views
4 years ago
MDAnalysis is one of the most widely-used Python libraries for the analysis of biomolecular simulations and structures, ...
6,740 views
The autodock result pdbqt file can be analysed using the schrodinger's pymol software. the 3d interactions can be taken as high ...
49,239 views
Today, Jupyter notebooks are everything you need to prepare a molecular dynamics simulation. Not only do they provide a unified ...
1,380 views
1 year ago
You can find the lecture notes and exercises for this lecture at https://missing.csail.mit.edu/2020/debugging-profiling/ Help us ...
101,136 views
5 years ago
How to download pdb from alphafold2 protein database. AlphaFold is an artificial intelligence program developed by Google's ...
3,216 views
In this tutorial, I show the process of automating the download of chemical structures from PubChem using a Python script.
2,294 views
This is a tutorial on creating PyMOL movies with both changing states (trajectories) and changing camera views. Timestamps: ...
3,884 views
Jeff Posnick gets into the nitty-gritty details of what do to when things go wrong, covering best practices for debugging your ...
24,494 views
12 years ago
openbabel is used to convert chemical file formats. Openbabel can convert more than 100 file formats like sdf mol, mol2, pdb, ...
4,208 views
PymolBiomoleculesTutorials molecular docking of multiple ligands with a single protein in Autodock vina virtual screening.
19,178 views
PymolBiomoleculesTutorials 00:18 Protein preparation 00:54 Remove water, ligands, cofactors, unwanted chains 1:28 save as ...
5,018 views
Tutorial Lab. Programowanie komputerów Python 3.8 W tym kursie znajdziesz szczegółowe informacje na temat: ⭐ Obsługa ...
322 views
Turn on the subtitles and here we go! A super quick demonstation of asyncio code. The way to watch this is pause and read and ...
368 views
9 years ago
How to perform protein ligand complex molecular dynamics simulation using gromacs in windows. For this Molecular dynamics ...
3,645 views
Gromacs molecular dynamics for beginners step by step tutorial protein topology: https://youtu.be/hM2fPemCvjw gromacs md ...
24,580 views
We provide a conceptual over of debugging. How to actually debug Java programs using Eclipse will be discussed in later videos ...
4,564 views
World, meet Stanley! He will be my research drone for in-flight AI, powered by an NVIDIA Jetson Nano and an OAK-D Lite. Today ...
51,540 views
2,773 views